Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm8410-201ENSMUST00000117225 605 ntBASIC11.79□□□□□ -0.52
Krt88Q9CPR6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm25948-201ENSMUST00000175334 112 ntBASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Chchd1-203ENSMUST00000224633 557 ntBASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Pck2-205ENSMUST00000226352 2784 ntBASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm18905-201ENSMUST00000205454 928 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.78□□□□□ -0.52
Krt88Q9CPR6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Krt88Q9CPR6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Krt88Q9CPR6 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms