Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb1Q91Y08 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdhb1Q91Y08 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Mir686-201ENSMUST00000102174 109 ntBASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Gm11618-201ENSMUST00000117946 267 ntBASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Gm8213-201ENSMUST00000118191 441 ntBASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdhb1Q91Y08 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Gm10156-201ENSMUST00000122364 462 ntBASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Proscos-202ENSMUST00000178990 666 ntBASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Gm28693-202ENSMUST00000190758 331 ntBASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb1Q91Y08 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.56□□□□□ -0.24
Pcdhb1Q91Y08 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms