Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm11531-201ENSMUST00000117614 555 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm12997-201ENSMUST00000120207 640 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm23363-201ENSMUST00000175024 79 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm26461-201ENSMUST00000175064 290 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm5950-201ENSMUST00000213337 772 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhb5Q91XZ5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm24830-201ENSMUST00000102024 166 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm13492-201ENSMUST00000119772 665 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm25890-201ENSMUST00000177643 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm22614-201ENSMUST00000178300 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm22042-201ENSMUST00000082989 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm26232-201ENSMUST00000083360 166 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm24136-201ENSMUST00000083374 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm26110-201ENSMUST00000083971 165 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhb5Q91XZ5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb5Q91XZ5 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb5Q91XZ5 Daam2-202ENSMUST00000224595 1926 ntBASIC15.33■□□□□ 0.05
Pcdhb5Q91XZ5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb5Q91XZ5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhb5Q91XZ5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm38092-201ENSMUST00000195600 653 ntBASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm22058-201ENSMUST00000083393 310 ntBASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.33■□□□□ 0.04
Pcdhb5Q91XZ5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms