Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc59Q8R2N0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm16215-201ENSMUST00000161990 637 ntBASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 BC001981-202ENSMUST00000191393 1545 ntBASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc59Q8R2N0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gm7488-201ENSMUST00000117148 684 ntBASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gm4875-201ENSMUST00000118257 786 ntBASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Gm20445-201ENSMUST00000061905 565 ntBASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc59Q8R2N0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.4□□□□□ -0.43
Ccdc59Q8R2N0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc59Q8R2N0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc59Q8R2N0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms