Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc60Q8C4J0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Mir686-201ENSMUST00000102174 109 ntBASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc60Q8C4J0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.65■□□□□ 0.26
Ccdc60Q8C4J0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc60Q8C4J0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ccdc60Q8C4J0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gm15824-201ENSMUST00000119516 955 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gm43433-201ENSMUST00000196573 481 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms