Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ptcd1Q8C2E4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm12217-201ENSMUST00000118858 696 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm15782-201ENSMUST00000121073 445 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm13097-201ENSMUST00000210722 397 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ptcd1Q8C2E4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ptcd1Q8C2E4 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.08■□□□□ 0.17
Ptcd1Q8C2E4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Mir6927-201ENSMUST00000184494 71 ntBASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.08■□□□□ 0.16
Ptcd1Q8C2E4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm14130-201ENSMUST00000118417 987 ntBASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm5523-201ENSMUST00000180415 997 ntBASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ptcd1Q8C2E4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms