Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm9794-201ENSMUST00000202370 423 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Trub1Q8C0D0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gm6244-201ENSMUST00000178732 841 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gm28693-202ENSMUST00000190758 331 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trub1Q8C0D0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.47□□□□□ -0.25
Trub1Q8C0D0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm11803-201ENSMUST00000119966 444 ntBASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm12490-201ENSMUST00000120255 560 ntBASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trub1Q8C0D0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms