Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Usp43Q8BUM9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm11814-201ENSMUST00000119515 929 ntBASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm13123-201ENSMUST00000122173 492 ntBASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm24196-201ENSMUST00000179161 110 ntBASIC13.23□□□□□ -0.29
Usp43Q8BUM9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Usp43Q8BUM9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gm8805-201ENSMUST00000117848 313 ntBASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gm37922-201ENSMUST00000195596 455 ntBASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gm7653-201ENSMUST00000214567 508 ntBASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Usp43Q8BUM9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Usp43Q8BUM9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms