Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp2bQ8BJF9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm26464-201ENSMUST00000157094 305 ntBASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm27306-201ENSMUST00000183970 107 ntBASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm20445-201ENSMUST00000061905 565 ntBASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2bQ8BJF9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chmp2bQ8BJF9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Gm27989-201ENSMUST00000184721 107 ntBASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
Chmp2bQ8BJF9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms