Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Matn2-203ENSMUST00000226766 3252 ntBASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc40Q8BI79 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm27437-201ENSMUST00000183429 107 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Mir6977-201ENSMUST00000184960 64 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm28631-201ENSMUST00000190740 334 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm6218-201ENSMUST00000219812 628 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc40Q8BI79 Map1b-203ENSMUST00000223725 2669 ntBASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc40Q8BI79 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms