Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Atg4dQ8BGV9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atg4dQ8BGV9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms