Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Gm12380-201ENSMUST00000119012 544 ntBASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Gm16296-201ENSMUST00000159905 325 ntBASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Gm28882-201ENSMUST00000185504 314 ntBASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trnp1Q80ZI1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm13045-201ENSMUST00000119019 712 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm11450-201ENSMUST00000121144 333 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm19459-201ENSMUST00000176240 835 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm7593-201ENSMUST00000187246 644 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Gm19931-201ENSMUST00000198920 368 ntBASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trnp1Q80ZI1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gm23949-201ENSMUST00000104027 127 ntBASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 AY036118-201ENSMUST00000200021 923 ntBASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Mir339-201ENSMUST00000083659 96 ntBASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trnp1Q80ZI1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.59□□□□□ -0.07
Trnp1Q80ZI1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms