Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smarcd3Q6P9Z1 Gm44241-201ENSMUST00000203230 1662 ntBASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Auts2-212ENSMUST00000178555 309 ntBASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm27306-201ENSMUST00000183970 107 ntBASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smarcd3Q6P9Z1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm21854-201ENSMUST00000179901 471 ntBASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm43094-201ENSMUST00000196549 921 ntBASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm19931-201ENSMUST00000198920 368 ntBASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gm20445-201ENSMUST00000061905 565 ntBASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms