Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sp140Q6NSQ5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sp140Q6NSQ5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Gm6152-201ENSMUST00000151704 340 ntBASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sp140Q6NSQ5 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gm12928-201ENSMUST00000117115 573 ntBASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms