Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Gm6630-201ENSMUST00000119199 454 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Gm5616-201ENSMUST00000165252 384 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.06□□□□□ -0.48
AtmQ62388 Gm8741-201ENSMUST00000174736 384 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
AtmQ62388 Gm28071-201ENSMUST00000190355 478 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Ginm1-202ENSMUST00000065124 300 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
AtmQ62388 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.06□□□□□ -0.48
AtmQ62388 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.06□□□□□ -0.48
AtmQ62388 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
AtmQ62388 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
AtmQ62388 Gm45398-201ENSMUST00000210561 165 ntBASIC12.06□□□□□ -0.48
AtmQ62388 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Gm9111-201ENSMUST00000219394 709 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
AtmQ62388 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
AtmQ62388 Grk6-205ENSMUST00000224653 2976 ntBASIC12.06□□□□□ -0.48
AtmQ62388 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
AtmQ62388 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AtmQ62388 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.05□□□□□ -0.48
AtmQ62388 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.05□□□□□ -0.48
AtmQ62388 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AtmQ62388 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
AtmQ62388 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.05□□□□□ -0.48
AtmQ62388 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
AtmQ62388 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.05□□□□□ -0.48
AtmQ62388 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.05□□□□□ -0.48
AtmQ62388 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gm11451-201ENSMUST00000118946 630 ntBASIC12.05□□□□□ -0.48
AtmQ62388 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Gm14005-208ENSMUST00000223654 681 ntBASIC12.05□□□□□ -0.48
AtmQ62388 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AtmQ62388 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm14644-201ENSMUST00000116671 647 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.04□□□□□ -0.48
AtmQ62388 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.04□□□□□ -0.48
AtmQ62388 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm10774-201ENSMUST00000188689 204 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.04□□□□□ -0.48
AtmQ62388 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Gm19994-201ENSMUST00000217086 586 ntBASIC12.04□□□□□ -0.48
AtmQ62388 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm14274-201ENSMUST00000117182 615 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.04□□□□□ -0.48
AtmQ62388 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Gm27627-201ENSMUST00000183644 150 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Gm45598-202ENSMUST00000210719 986 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms