Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.42■□□□□ 0.06
Ctr9Q62018 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Gm25927-201ENSMUST00000175058 117 ntBASIC15.42■□□□□ 0.06
Ctr9Q62018 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Gm19184-201ENSMUST00000196798 928 ntBASIC15.42■□□□□ 0.06
Ctr9Q62018 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.42■□□□□ 0.06
Ctr9Q62018 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Ctr9Q62018 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ctr9Q62018 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.41■□□□□ 0.06
Ctr9Q62018 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm6222-202ENSMUST00000182143 629 ntBASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm37008-201ENSMUST00000195712 319 ntBASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ctr9Q62018 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ctr9Q62018 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.4■□□□□ 0.06
Ctr9Q62018 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ctr9Q62018 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Ctr9Q62018 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ctr9Q62018 Gm45880-201ENSMUST00000213041 853 ntBASIC15.4■□□□□ 0.06
Ctr9Q62018 Gm19163-201ENSMUST00000223313 780 ntBASIC15.4■□□□□ 0.06
Ctr9Q62018 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.4■□□□□ 0.06
Ctr9Q62018 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ctr9Q62018 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms