Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.61□□□□□ -0.23
Smarcd1Q61466 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd1Q61466 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.61□□□□□ -0.23
Smarcd1Q61466 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gm14704-201ENSMUST00000120300 874 ntBASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gm22121-201ENSMUST00000175148 54 ntBASIC13.6□□□□□ -0.23
Smarcd1Q61466 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.6□□□□□ -0.23
Smarcd1Q61466 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd1Q61466 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.59□□□□□ -0.23
Smarcd1Q61466 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.59□□□□□ -0.23
Smarcd1Q61466 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gm22018-201ENSMUST00000104357 131 ntBASIC13.59□□□□□ -0.23
Smarcd1Q61466 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gm42693-201ENSMUST00000196779 631 ntBASIC13.59□□□□□ -0.23
Smarcd1Q61466 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd1Q61466 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd1Q61466 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm11591-201ENSMUST00000120063 702 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms