Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.67■□□□□ 0.1
Mre11Q61216 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Mre11Q61216 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Mre11Q61216 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.67■□□□□ 0.1
Mre11Q61216 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.67■□□□□ 0.1
Mre11Q61216 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.67■□□□□ 0.1
Mre11Q61216 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Mre11Q61216 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.67■□□□□ 0.1
Mre11Q61216 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mre11Q61216 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.66■□□□□ 0.1
Mre11Q61216 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Mre11Q61216 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm20614-201ENSMUST00000177106 632 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm44953-201ENSMUST00000208745 1286 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.66■□□□□ 0.1
Mre11Q61216 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mre11Q61216 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Mre11Q61216 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm28877-201ENSMUST00000191349 604 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.65■□□□□ 0.1
Mre11Q61216 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.65■□□□□ 0.1
Mre11Q61216 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.65■□□□□ 0.1
Mre11Q61216 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mre11Q61216 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.64■□□□□ 0.09
Mre11Q61216 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mre11Q61216 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mre11Q61216 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mre11Q61216 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mre11Q61216 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.64■□□□□ 0.09
Mre11Q61216 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Mre11Q61216 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Mre11Q61216 Gm11779-201ENSMUST00000118541 368 ntBASIC15.64■□□□□ 0.09
Mre11Q61216 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Mre11Q61216 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.64■□□□□ 0.09
Mre11Q61216 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.64■□□□□ 0.09
Mre11Q61216 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.64■□□□□ 0.09
Mre11Q61216 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms