Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Slc6a4Q60857 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.37□□□□□ -0.27
Slc6a4Q60857 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm14704-201ENSMUST00000120300 874 ntBASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm22121-201ENSMUST00000175148 54 ntBASIC13.37□□□□□ -0.27
Slc6a4Q60857 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Slc6a4Q60857 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.36□□□□□ -0.27
Slc6a4Q60857 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.36□□□□□ -0.27
Slc6a4Q60857 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.36□□□□□ -0.27
Slc6a4Q60857 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Slc6a4Q60857 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Mir1247-201ENSMUST00000116706 82 ntBASIC13.35□□□□□ -0.27
Slc6a4Q60857 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.35□□□□□ -0.27
Slc6a4Q60857 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.35□□□□□ -0.27
Slc6a4Q60857 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Gm42627-201ENSMUST00000197347 224 ntBASIC13.35□□□□□ -0.27
Slc6a4Q60857 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.35□□□□□ -0.27
Slc6a4Q60857 Olfr284-202ENSMUST00000206647 966 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms