Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nlrc4Q3UP24 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Gm2231-201ENSMUST00000125661 612 ntBASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nlrc4Q3UP24 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm11637-201ENSMUST00000120601 592 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm1335-201ENSMUST00000121653 386 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm26927-201ENSMUST00000182385 965 ntBASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nlrc4Q3UP24 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms