Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.73□□□□□ -0.21
Cul4aQ3TCH7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Mir686-201ENSMUST00000102174 109 ntBASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Gm5687-201ENSMUST00000118252 640 ntBASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cul4aQ3TCH7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gm44872-201ENSMUST00000207864 420 ntBASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.71□□□□□ -0.21
Cul4aQ3TCH7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cul4aQ3TCH7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.7□□□□□ -0.22
Cul4aQ3TCH7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms