Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm14921-201ENSMUST00000118643 908 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gm3329-201ENSMUST00000159873 556 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Gm45310-201ENSMUST00000210436 275 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 AC102368.1-201ENSMUST00000227161 892 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Mir339-201ENSMUST00000083659 96 ntBASIC8.62□□□□□ -1.03
PrkdcP97313 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
PrkdcP97313 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
PrkdcP97313 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm24398-201ENSMUST00000157870 109 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Mir6973a-201ENSMUST00000183646 78 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC8.61□□□□□ -1.03
PrkdcP97313 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 AC154572.1-201ENSMUST00000226098 1204 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm8617-201ENSMUST00000118796 2222 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm8756-201ENSMUST00000183250 929 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 CT485606.1-201ENSMUST00000213187 878 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 AC122346.3-201ENSMUST00000223983 306 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 AC154759.1-201ENSMUST00000224137 1159 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm13286-201ENSMUST00000117750 537 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm15703-201ENSMUST00000120250 880 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC8.61□□□□□ -1.03
PrkdcP97313 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Olfr692-202ENSMUST00000217827 1126 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm5805-201ENSMUST00000072779 456 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PrkdcP97313 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm2420-202ENSMUST00000202224 2249 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
PrkdcP97313 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm22594-201ENSMUST00000104251 130 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
PrkdcP97313 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm12663-201ENSMUST00000118481 958 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
PrkdcP97313 Gm16305-201ENSMUST00000140747 556 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm37197-201ENSMUST00000195607 401 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Gm3433-201ENSMUST00000210149 1058 ntBASIC8.61□□□□□ -1.03
PrkdcP97313 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
PrkdcP97313 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
PrkdcP97313 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
PrkdcP97313 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms