Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Trim43cP86449 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm22331-201ENSMUST00000158066 136 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm29127-201ENSMUST00000188304 517 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.2□□□□□ -0.14
Trim43cP86449 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trim43cP86449 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim43cP86449 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim43cP86449 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trim43cP86449 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim43cP86449 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim43cP86449 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm13369-201ENSMUST00000119442 987 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm7029-201ENSMUST00000173226 450 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim43cP86449 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim43cP86449 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.19□□□□□ -0.14
Trim43cP86449 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim43cP86449 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim43cP86449 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms