Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 Gm6180-201ENSMUST00000065243 498 ntBASIC13.47□□□□□ -0.25
Trim43bP86448 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim43bP86448 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim43bP86448 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.47□□□□□ -0.25
Trim43bP86448 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim43bP86448 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim43bP86448 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43bP86448 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Trim43bP86448 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trim43bP86448 Gm11478-201ENSMUST00000117851 599 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 Gm15240-201ENSMUST00000118156 720 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim43bP86448 Gm12091-201ENSMUST00000146791 830 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim43bP86448 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43bP86448 Gm6745-201ENSMUST00000199216 526 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim43bP86448 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim43bP86448 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim43bP86448 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.46□□□□□ -0.25
Trim43bP86448 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim43bP86448 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trim43bP86448 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43bP86448 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43bP86448 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43bP86448 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim43bP86448 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.46□□□□□ -0.26
Trim43bP86448 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Trim43bP86448 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.46□□□□□ -0.26
Trim43bP86448 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim43bP86448 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.45□□□□□ -0.26
Trim43bP86448 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim43bP86448 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.45□□□□□ -0.26
Trim43bP86448 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim43bP86448 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.45□□□□□ -0.26
Trim43bP86448 Gm7653-201ENSMUST00000214567 508 ntBASIC13.45□□□□□ -0.26
Trim43bP86448 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim43bP86448 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43bP86448 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms