Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ThraP63058 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
ThraP63058 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ThraP63058 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ThraP63058 Gm12957-201ENSMUST00000117835 377 ntBASIC13.26□□□□□ -0.29
ThraP63058 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.26□□□□□ -0.29
ThraP63058 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.26□□□□□ -0.29
ThraP63058 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Gm45784-201ENSMUST00000188360 142 ntBASIC13.26□□□□□ -0.29
ThraP63058 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.26□□□□□ -0.29
ThraP63058 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ThraP63058 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ThraP63058 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.25□□□□□ -0.29
ThraP63058 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.25□□□□□ -0.29
ThraP63058 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ThraP63058 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.25□□□□□ -0.29
ThraP63058 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.25□□□□□ -0.29
ThraP63058 Gm38223-201ENSMUST00000194484 695 ntBASIC13.25□□□□□ -0.29
ThraP63058 Gm45841-201ENSMUST00000207700 164 ntBASIC13.25□□□□□ -0.29
ThraP63058 Gm6007-201ENSMUST00000208170 823 ntBASIC13.25□□□□□ -0.29
ThraP63058 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.25□□□□□ -0.29
ThraP63058 Gm7561-201ENSMUST00000211203 886 ntBASIC13.25□□□□□ -0.29
ThraP63058 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
ThraP63058 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Gm6091-201ENSMUST00000098307 165 ntBASIC13.25□□□□□ -0.29
ThraP63058 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ThraP63058 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ThraP63058 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.24□□□□□ -0.29
ThraP63058 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 Mir698-201ENSMUST00000102164 109 ntBASIC13.24□□□□□ -0.29
ThraP63058 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.24□□□□□ -0.29
ThraP63058 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.24□□□□□ -0.29
ThraP63058 Snora78-201ENSMUST00000158630 128 ntBASIC13.24□□□□□ -0.29
ThraP63058 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Gm27847-201ENSMUST00000183711 107 ntBASIC13.24□□□□□ -0.29
ThraP63058 Gm27375-201ENSMUST00000183799 107 ntBASIC13.24□□□□□ -0.29
ThraP63058 Gm44397-201ENSMUST00000195950 113 ntBASIC13.24□□□□□ -0.29
ThraP63058 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.24□□□□□ -0.29
ThraP63058 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ThraP63058 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ThraP63058 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.24□□□□□ -0.29
ThraP63058 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms