Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm3P62311 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.88□□□□□ -0.51
Lsm3P62311 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.88□□□□□ -0.51
Lsm3P62311 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.88□□□□□ -0.51
Lsm3P62311 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Rpph1-201ENSMUST00000175096 319 ntBASIC11.88□□□□□ -0.51
Lsm3P62311 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.88□□□□□ -0.51
Lsm3P62311 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Lsm3P62311 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Lsm3P62311 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.88□□□□□ -0.51
Lsm3P62311 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Gm11452-201ENSMUST00000122376 690 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Lsm3P62311 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.87□□□□□ -0.51
Lsm3P62311 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm3P62311 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.86□□□□□ -0.51
Lsm3P62311 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Lsm3P62311 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm3P62311 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.86□□□□□ -0.51
Lsm3P62311 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms