Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Gm6458-201ENSMUST00000211573 635 ntBASIC12.54□□□□□ -0.4
Ube2e3P52483 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.54□□□□□ -0.4
Ube2e3P52483 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ube2e3P52483 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube2e3P52483 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm8213-201ENSMUST00000118191 441 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm9002-201ENSMUST00000178437 499 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm5356-201ENSMUST00000093326 615 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ube2e3P52483 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.53□□□□□ -0.4
Ube2e3P52483 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube2e3P52483 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.52□□□□□ -0.4
Ube2e3P52483 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube2e3P52483 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ube2e3P52483 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Mir1894-201ENSMUST00000122802 81 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.52□□□□□ -0.41
Ube2e3P52483 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube2e3P52483 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube2e3P52483 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.52□□□□□ -0.41
Ube2e3P52483 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube2e3P52483 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms