Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ercc3P49135 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Ercc3P49135 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm11618-201ENSMUST00000117946 267 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Gm16177-201ENSMUST00000120728 718 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm29127-201ENSMUST00000188304 517 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ercc3P49135 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.53■□□□□ 0.08
Ercc3P49135 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ercc3P49135 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.52■□□□□ 0.08
Ercc3P49135 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ercc3P49135 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.52■□□□□ 0.08
Ercc3P49135 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.52■□□□□ 0.08
Ercc3P49135 Gm15824-201ENSMUST00000119516 955 ntBASIC15.52■□□□□ 0.08
Ercc3P49135 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.52■□□□□ 0.08
Ercc3P49135 Gm29649-201ENSMUST00000185649 419 ntBASIC15.52■□□□□ 0.08
Ercc3P49135 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.52■□□□□ 0.08
Ercc3P49135 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.52■□□□□ 0.08
Ercc3P49135 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ercc3P49135 Gm10146-201ENSMUST00000072739 309 ntBASIC15.52■□□□□ 0.08
Ercc3P49135 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ercc3P49135 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ercc3P49135 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Gm8213-201ENSMUST00000118191 441 ntBASIC15.51■□□□□ 0.07
Ercc3P49135 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.51■□□□□ 0.07
Ercc3P49135 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.51■□□□□ 0.07
Ercc3P49135 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.51■□□□□ 0.07
Ercc3P49135 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ercc3P49135 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ercc3P49135 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Ercc3P49135 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.5■□□□□ 0.07
Ercc3P49135 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Ercc3P49135 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Ercc3P49135 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.5■□□□□ 0.07
Ercc3P49135 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.5■□□□□ 0.07
Ercc3P49135 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.5■□□□□ 0.07
Ercc3P49135 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ercc3P49135 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms