Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rfx3P48381 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rfx3P48381 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.83□□□□□ -0.52
Rfx3P48381 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rfx3P48381 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.82□□□□□ -0.52
Rfx3P48381 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rfx3P48381 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Gm11524-201ENSMUST00000119349 807 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.82□□□□□ -0.52
Rfx3P48381 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Gm27437-201ENSMUST00000183429 107 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 Gm38144-201ENSMUST00000192790 465 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.82□□□□□ -0.52
Rfx3P48381 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.82□□□□□ -0.52
Rfx3P48381 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 Gm19078-201ENSMUST00000206311 727 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.82□□□□□ -0.52
Rfx3P48381 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.82□□□□□ -0.52
Rfx3P48381 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rfx3P48381 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rfx3P48381 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rfx3P48381 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfx3P48381 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rfx3P48381 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.81□□□□□ -0.52
Rfx3P48381 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfx3P48381 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfx3P48381 Gm5354-201ENSMUST00000182417 973 ntBASIC11.81□□□□□ -0.52
Rfx3P48381 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rfx3P48381 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.81□□□□□ -0.52
Rfx3P48381 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.81□□□□□ -0.52
Rfx3P48381 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rfx3P48381 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.81□□□□□ -0.52
Rfx3P48381 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms