Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.98□□□□□ -0.49
Nkx2-2P42586 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx2-2P42586 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gm22331-201ENSMUST00000158066 136 ntBASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gm27839-201ENSMUST00000184242 106 ntBASIC11.97□□□□□ -0.49
Nkx2-2P42586 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.97□□□□□ -0.49
Nkx2-2P42586 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-2P42586 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm13369-201ENSMUST00000119442 987 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm11637-201ENSMUST00000120601 592 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm2231-201ENSMUST00000125661 612 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm27847-201ENSMUST00000183711 107 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm27375-201ENSMUST00000183799 107 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm7063-201ENSMUST00000186840 981 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm7561-201ENSMUST00000211203 886 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.96□□□□□ -0.49
Nkx2-2P42586 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms