Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.29□□□□□ -0.44
Sox6P40645 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Paupar-201ENSMUST00000194826 3482 ntBASIC12.29□□□□□ -0.44
Sox6P40645 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Gm22189-201ENSMUST00000103822 86 ntBASIC12.29□□□□□ -0.44
Sox6P40645 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.29□□□□□ -0.44
Sox6P40645 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox6P40645 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.29□□□□□ -0.44
Sox6P40645 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox6P40645 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.29□□□□□ -0.44
Sox6P40645 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sox6P40645 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox6P40645 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox6P40645 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox6P40645 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Gm42612-201ENSMUST00000197986 623 ntBASIC12.28□□□□□ -0.44
Sox6P40645 Gm43170-201ENSMUST00000199827 612 ntBASIC12.28□□□□□ -0.44
Sox6P40645 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.28□□□□□ -0.44
Sox6P40645 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Gm6218-201ENSMUST00000219812 628 ntBASIC12.28□□□□□ -0.44
Sox6P40645 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.28□□□□□ -0.44
Sox6P40645 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.28□□□□□ -0.44
Sox6P40645 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox6P40645 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.28□□□□□ -0.44
Sox6P40645 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox6P40645 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox6P40645 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.27□□□□□ -0.44
Sox6P40645 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Sox6P40645 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox6P40645 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Sox6P40645 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms