Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.3□□□□□ -0.12
Pde6bP23440 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pde6bP23440 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pde6bP23440 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Pde6bP23440 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Gm12241-201ENSMUST00000118330 726 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.29□□□□□ -0.12
Pde6bP23440 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Gm7584-201ENSMUST00000175829 940 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Olfr284-202ENSMUST00000206647 966 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.29□□□□□ -0.12
Pde6bP23440 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pde6bP23440 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pde6bP23440 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pde6bP23440 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pde6bP23440 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pde6bP23440 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pde6bP23440 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.28□□□□□ -0.12
Pde6bP23440 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Pde6bP23440 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.28□□□□□ -0.12
Pde6bP23440 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.28□□□□□ -0.12
Pde6bP23440 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.28□□□□□ -0.12
Pde6bP23440 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.28□□□□□ -0.12
Pde6bP23440 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.28□□□□□ -0.12
Pde6bP23440 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pde6bP23440 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6bP23440 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.12
Pde6bP23440 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pde6bP23440 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.27□□□□□ -0.12
Pde6bP23440 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6bP23440 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pde6bP23440 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6bP23440 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6bP23440 Gm29396-201ENSMUST00000185659 716 ntBASIC14.27□□□□□ -0.13
Pde6bP23440 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6bP23440 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms