Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.9□□□□□ -0.5
Cbx3P23198 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.9□□□□□ -0.5
Cbx3P23198 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cbx3P23198 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.9□□□□□ -0.5
Cbx3P23198 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.9□□□□□ -0.5
Cbx3P23198 Gm12350-201ENSMUST00000121208 462 ntBASIC11.9□□□□□ -0.5
Cbx3P23198 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.9□□□□□ -0.5
Cbx3P23198 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cbx3P23198 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cbx3P23198 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cbx3P23198 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Cbx3P23198 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.9□□□□□ -0.51
Cbx3P23198 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cbx3P23198 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.89□□□□□ -0.51
Cbx3P23198 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cbx3P23198 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.89□□□□□ -0.51
Cbx3P23198 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cbx3P23198 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cbx3P23198 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.89□□□□□ -0.51
Cbx3P23198 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.89□□□□□ -0.51
Cbx3P23198 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.89□□□□□ -0.51
Cbx3P23198 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.89□□□□□ -0.51
Cbx3P23198 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.89□□□□□ -0.51
Cbx3P23198 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.89□□□□□ -0.51
Cbx3P23198 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cbx3P23198 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cbx3P23198 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cbx3P23198 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cbx3P23198 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cbx3P23198 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.88□□□□□ -0.51
Cbx3P23198 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cbx3P23198 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.88□□□□□ -0.51
Cbx3P23198 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cbx3P23198 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.88□□□□□ -0.51
Cbx3P23198 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cbx3P23198 Gm14140-201ENSMUST00000119999 995 ntBASIC11.88□□□□□ -0.51
Cbx3P23198 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.88□□□□□ -0.51
Cbx3P23198 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.88□□□□□ -0.51
Cbx3P23198 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.88□□□□□ -0.51
Cbx3P23198 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms