Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cfdp1O88271 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfdp1O88271 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfdp1O88271 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cfdp1O88271 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.29■□□□□ 0.2
Cfdp1O88271 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfdp1O88271 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cfdp1O88271 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfdp1O88271 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.28■□□□□ 0.2
Cfdp1O88271 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 Gm37042-201ENSMUST00000193816 581 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Gm9823-201ENSMUST00000051212 327 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.28■□□□□ 0.2
Cfdp1O88271 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cfdp1O88271 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cfdp1O88271 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.27■□□□□ 0.2
Cfdp1O88271 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.27■□□□□ 0.2
Cfdp1O88271 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.27■□□□□ 0.2
Cfdp1O88271 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Cfdp1O88271 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.27■□□□□ 0.2
Cfdp1O88271 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.27■□□□□ 0.2
Cfdp1O88271 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Cfdp1O88271 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cfdp1O88271 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfdp1O88271 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfdp1O88271 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cfdp1O88271 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.27■□□□□ 0.19
Cfdp1O88271 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cfdp1O88271 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cfdp1O88271 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.27■□□□□ 0.19
Cfdp1O88271 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.26■□□□□ 0.19
Cfdp1O88271 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cfdp1O88271 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cfdp1O88271 Gm11591-201ENSMUST00000120063 702 ntBASIC16.26■□□□□ 0.19
Cfdp1O88271 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms