Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nkx1-1G3UXB3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm16149-201ENSMUST00000117631 309 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm13408-201ENSMUST00000119822 798 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm13935-201ENSMUST00000121859 798 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm43487-201ENSMUST00000200331 1031 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm8703-201ENSMUST00000203793 730 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Nkx1-1G3UXB3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm11451-201ENSMUST00000118946 630 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm22668-201ENSMUST00000158716 260 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm18200-201ENSMUST00000173265 833 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm18190-201ENSMUST00000174801 832 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm42783-201ENSMUST00000197075 795 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm17850-201ENSMUST00000210023 1154 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Gm5781-201ENSMUST00000219792 443 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Nkx1-1G3UXB3 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms