Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Gm3543D3Z235 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.86□□□□□ -0.51
Gm3543D3Z235 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.86□□□□□ -0.51
Gm3543D3Z235 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm29649-201ENSMUST00000185649 419 ntBASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.86□□□□□ -0.51
Gm3543D3Z235 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm3543D3Z235 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm12390-201ENSMUST00000117897 397 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm8652-201ENSMUST00000181363 964 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.85□□□□□ -0.51
Gm3543D3Z235 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm3543D3Z235 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm3543D3Z235 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms