Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm44069-201ENSMUST00000204898 506 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm8463-201ENSMUST00000208573 613 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb1A2AQ07 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Mir686-201ENSMUST00000102174 109 ntBASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Gm6152-201ENSMUST00000151704 340 ntBASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.38□□□□□ -0.27
Tubb1A2AQ07 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb1A2AQ07 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm10576-201ENSMUST00000191927 825 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm18473-201ENSMUST00000220543 868 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb1A2AQ07 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.36□□□□□ -0.27
Tubb1A2AQ07 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb1A2AQ07 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.36□□□□□ -0.27
Tubb1A2AQ07 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms