Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm6983-201ENSMUST00000214912 628 ntBASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Mir7654-201ENSMUST00000185082 70 ntBASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Mbd1Q9Z2E2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Mbd1Q9Z2E2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Mbd1Q9Z2E2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms