Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.81□□□□□ -0.52
Krt88Q9CPR6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22065-201ENSMUST00000103753 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22066-201ENSMUST00000103761 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24932-201ENSMUST00000103763 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24115-201ENSMUST00000103799 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22190-201ENSMUST00000103827 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22191-201ENSMUST00000103831 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24721-201ENSMUST00000103849 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm28018-201ENSMUST00000103869 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm26399-201ENSMUST00000103937 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25349-201ENSMUST00000177728 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm23616-201ENSMUST00000177797 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25871-201ENSMUST00000177816 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24752-201ENSMUST00000178240 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24496-201ENSMUST00000178287 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25649-201ENSMUST00000178476 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25548-201ENSMUST00000178681 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm23147-201ENSMUST00000178841 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm26095-201ENSMUST00000179270 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22171-201ENSMUST00000179283 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm23936-201ENSMUST00000179354 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm22619-201ENSMUST00000179516 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25255-201ENSMUST00000179579 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24755-201ENSMUST00000179691 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm26506-201ENSMUST00000179692 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm25086-201ENSMUST00000179931 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm23243-201ENSMUST00000180047 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24659-201ENSMUST00000180212 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm24169-201ENSMUST00000180244 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm23689-201ENSMUST00000180354 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm27359-201ENSMUST00000184153 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm27785-201ENSMUST00000184268 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm27466-201ENSMUST00000184396 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm27703-201ENSMUST00000184836 110 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm46209-201ENSMUST00000217912 553 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Krt88Q9CPR6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Krt88Q9CPR6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms