Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.77□□□□□ -0.36
Msh4Q99MT2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Mir1894-201ENSMUST00000122802 81 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm44397-201ENSMUST00000195950 113 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.77□□□□□ -0.37
Msh4Q99MT2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.77□□□□□ -0.37
Msh4Q99MT2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.76□□□□□ -0.37
Msh4Q99MT2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gm43433-201ENSMUST00000196573 481 ntBASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.76□□□□□ -0.37
Msh4Q99MT2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.76□□□□□ -0.37
Msh4Q99MT2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.76□□□□□ -0.37
Msh4Q99MT2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msh4Q99MT2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.75□□□□□ -0.37
Msh4Q99MT2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.75□□□□□ -0.37
Msh4Q99MT2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.75□□□□□ -0.37
Msh4Q99MT2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.75□□□□□ -0.37
Msh4Q99MT2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms