Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Gm5161-201ENSMUST00000075243 853 ntBASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Gm24447-201ENSMUST00000083977 338 ntBASIC12.36□□□□□ -0.43
Nkd1Q99MH6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nkd1Q99MH6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Mir6956-201ENSMUST00000183598 62 ntBASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkd1Q99MH6 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm38144-201ENSMUST00000192790 465 ntBASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkd1Q99MH6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms