Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm23984-201ENSMUST00000157139 203 ntBASIC13.81□□□□□ -0.2
Usp11Q99K46 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm24447-201ENSMUST00000083977 338 ntBASIC13.81□□□□□ -0.2
Usp11Q99K46 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.81□□□□□ -0.2
Usp11Q99K46 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.81□□□□□ -0.2
Usp11Q99K46 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usp11Q99K46 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.8□□□□□ -0.2
Usp11Q99K46 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.8□□□□□ -0.2
Usp11Q99K46 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Gm12091-201ENSMUST00000146791 830 ntBASIC13.8□□□□□ -0.2
Usp11Q99K46 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp11Q99K46 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.8□□□□□ -0.2
Usp11Q99K46 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Gm5161-201ENSMUST00000075243 853 ntBASIC13.8□□□□□ -0.2
Usp11Q99K46 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.8□□□□□ -0.2
Usp11Q99K46 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usp11Q99K46 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.79□□□□□ -0.2
Usp11Q99K46 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.79□□□□□ -0.2
Usp11Q99K46 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.79□□□□□ -0.2
Usp11Q99K46 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usp11Q99K46 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms