Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lims1Q99JW4 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.96□□□□□ -0.5
Lims1Q99JW4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lims1Q99JW4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lims1Q99JW4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lims1Q99JW4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm15321-201ENSMUST00000121290 288 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm12151-201ENSMUST00000121374 290 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm42790-201ENSMUST00000201268 969 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.95□□□□□ -0.5
Lims1Q99JW4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lims1Q99JW4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.94□□□□□ -0.5
Lims1Q99JW4 Pck2-205ENSMUST00000226352 2784 ntBASIC11.94□□□□□ -0.5
Lims1Q99JW4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.94□□□□□ -0.5
Lims1Q99JW4 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.94□□□□□ -0.5
Lims1Q99JW4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.94□□□□□ -0.5
Lims1Q99JW4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lims1Q99JW4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lims1Q99JW4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.93□□□□□ -0.5
Lims1Q99JW4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lims1Q99JW4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms