Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.06■□□□□ 0
Ddx41Q91VN6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx41Q91VN6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx41Q91VN6 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx41Q91VN6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx41Q91VN6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ddx41Q91VN6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.05■□□□□ 0
Ddx41Q91VN6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.05■□□□□ 0
Ddx41Q91VN6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ddx41Q91VN6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
Ddx41Q91VN6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.05■□□□□ -0
Ddx41Q91VN6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ddx41Q91VN6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.05■□□□□ -0
Ddx41Q91VN6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.05■□□□□ -0
Ddx41Q91VN6 Gm29705-201ENSMUST00000212598 474 ntBASIC15.05■□□□□ -0
Ddx41Q91VN6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.05■□□□□ -0
Ddx41Q91VN6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx41Q91VN6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.05■□□□□ -0
Ddx41Q91VN6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Mir6420-201ENSMUST00000185032 102 ntBASIC15.04■□□□□ -0
Ddx41Q91VN6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.04■□□□□ -0
Ddx41Q91VN6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.04■□□□□ -0
Ddx41Q91VN6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ddx41Q91VN6 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.04■□□□□ -0
Ddx41Q91VN6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx41Q91VN6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.03■□□□□ -0
Ddx41Q91VN6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm5187-201ENSMUST00000117317 991 ntBASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm12203-201ENSMUST00000118235 598 ntBASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm12209-201ENSMUST00000120089 596 ntBASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.03■□□□□ -0
Ddx41Q91VN6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms