Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.36□□□□□ -0.11
Rpap2Q8VC34 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpap2Q8VC34 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm13369-201ENSMUST00000119442 987 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm24644-201ENSMUST00000157114 139 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm27839-201ENSMUST00000184242 106 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm6091-201ENSMUST00000098307 165 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpap2Q8VC34 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms