Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdt1Q8R4E9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gm17330-201ENSMUST00000221047 165 ntBASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdt1Q8R4E9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Gm43822-201ENSMUST00000200285 476 ntBASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdt1Q8R4E9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdt1Q8R4E9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdt1Q8R4E9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms