Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Mir874-201ENSMUST00000104769 76 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm11531-201ENSMUST00000117614 555 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm13492-201ENSMUST00000119772 665 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm19931-201ENSMUST00000198920 368 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp7Q8R1T1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm23363-201ENSMUST00000175024 79 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp7Q8R1T1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm23270-201ENSMUST00000104055 131 ntBASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Gm5950-201ENSMUST00000213337 772 ntBASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chmp7Q8R1T1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gm25214-201ENSMUST00000104573 129 ntBASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms