Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc40Q8BI79 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Gm15678-201ENSMUST00000117573 960 ntBASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Gm15376-201ENSMUST00000122258 783 ntBASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc40Q8BI79 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc40Q8BI79 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Mir874-201ENSMUST00000104769 76 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm10576-201ENSMUST00000191927 825 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm44855-201ENSMUST00000205725 362 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc40Q8BI79 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms