Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm16202-201ENSMUST00000117532 544 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm44069-201ENSMUST00000204898 506 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm18056-201ENSMUST00000207670 568 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm18061-201ENSMUST00000208350 562 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm18063-201ENSMUST00000208529 568 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Gm18052-201ENSMUST00000208750 559 ntBASIC12.15□□□□□ -0.46
Pif1Q80SX8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pif1Q80SX8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pif1Q80SX8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pif1Q80SX8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Pif1Q80SX8 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pif1Q80SX8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pif1Q80SX8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.47
Pif1Q80SX8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.14□□□□□ -0.47
Pif1Q80SX8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Acot6-202ENSMUST00000222921 3622 ntBASIC12.14□□□□□ -0.47
Pif1Q80SX8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm15236-201ENSMUST00000117309 379 ntBASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.14□□□□□ -0.47
Pif1Q80SX8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.14□□□□□ -0.47
Pif1Q80SX8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.14□□□□□ -0.47
Pif1Q80SX8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pif1Q80SX8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pif1Q80SX8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pif1Q80SX8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms