Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nudcd1Q6PIP5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Mir686-201ENSMUST00000102174 109 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm22018-201ENSMUST00000104357 131 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Mir1247-201ENSMUST00000116706 82 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm11978-201ENSMUST00000122315 466 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm16379-201ENSMUST00000161469 348 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm25927-201ENSMUST00000175058 117 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm8762-201ENSMUST00000193486 339 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm43118-201ENSMUST00000199149 775 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nudcd1Q6PIP5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Nudcd1Q6PIP5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Gm45880-201ENSMUST00000213041 853 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms